SubtiBank SubtiBank
yomL [2018-02-10T16:05:24.000Z]
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yomL [2018-02-10T16:05:24.000Z]

unknown protein
locus
BSU21320
pI
9.36
mw
25.28 kDa
protein length
228 aa Sequence Blast
gene length
684 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProt

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • The protein

    Paralogous protein(s)

  • [protein|D04CF5261C840E9A1BC7FFE5B6F492A46EC0971C|YddT] (the two proteins differ in only 4 out of 228 amino acids)

    • Biological materials

    Mutant

  • BP118 (yomL::kan), available in [SW|Fabian Commichau]'s lab [Pubmed|24178028]
  • BKE21320 (Δ[gene|25ACC4472A56ABF9F0FCA75CC24579FBC59E4C2F|yomL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTGAAATCCTCCTTGTG, downstream forward: _UP4_TAATTTTAAAATCACTTTGT
  • BKK21320 (Δ[gene|25ACC4472A56ABF9F0FCA75CC24579FBC59E4C2F|yomL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTGAAATCCTCCTTGTG, downstream forward: _UP4_TAATTTTAAAATCACTTTGT

    • Expression vector

  • IPTG inducible expression of Strep-''yomL'' in ''E. coli'': pGP2580 (in [SW|pGP172]), available in [SW|Jörg Stülke]'s lab

    • References

  • 17114254,23420519,24178028